PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G29990.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family TCP
Protein Properties Length: 401aa    MW: 40523.6 Da    PI: 9.1563
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G29990.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP134.41e-41652411137
              TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 
                      aa+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++     
  OPUNC02G29990.1  65 AAPKRSSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSLSAPahlra 158
                      689*******************************************************************999878888888886666688888 PP

              TCP  89 ...............................kaaksaakskksqksaasalnlakesrakarar..are.rtrekmriknkln 137
                                                     ++++s  +   + +s +  l+++ + +a a a   +r+ r++++m+++++++
  OPUNC02G29990.1 159 lpspaaaarfgsradawdrvvslgfpsegpaSSSSSPSPLLLNFHSGSVGLDVQPSPSAAAAAAdlSRKrRWEQEMQQQQQQQ 241
                      99999999999999999999999999999965555555888888888888999996665555554777768888888887766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036346.6E-4471241IPR005333Transcription factor, TCP
PROSITE profilePS5136927.86172126IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010029Biological Processregulation of seed germination
GO:0010229Biological Processinflorescence development
GO:0031347Biological Processregulation of defense response
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MTMDVAGDAG GGRRPNFPLQ LLEKKEEQPC SSSAAGGGGP SSAGGNGNNG SGPGGAGGEM  60
QVRKAAPKRS STKDRHTKVE GRGRRIRMPA LCAARVFQLT RELGHKTDGE TIEWLLQQAE  120
PAVIAATGTG TIPANFTSLN ISLRSSGSSL SAPAHLRALP SPAAAARFGS RADAWDRVVS  180
LGFPSEGPAS SSSSPSPLLL NFHSGSVGLD VQPSPSAAAA AADLSRKRRW EQEMQQQQQQ  240
QQQQQQQQYQ QQMAGYTQSQ MPGTVWMVPS NSTQGGGPSG GGGGGGGSGE SIWTFPQMSS  300
AAAAAAVYRG SVPSGLHFMN FPAPMALLPG QQLGLGPVGG GGGGGGGGGG GEGHMGILAA  360
LNAYRTQAAT DAAGEQGGGG SSQQQHGGDG ERHQSISTSD S
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00396DAPTransfer from AT3G47620Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0057330.0AP005733.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03.
GenBankAP0058480.0AP005848.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11.
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015624016.11e-176PREDICTED: transcription factor TCP14
SwissprotQ93Z002e-58TCP14_ARATH; Transcription factor TCP14
TrEMBLA0A0E0K5840.0A0A0E0K584_ORYPU; Uncharacterized protein
STRINGORGLA02G0279800.11e-176(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.17e-45TCP family protein